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Lay H&E and multiplexed stains under the cells, and set each channel’s colour and levels.

Tutorial in preparation

This tutorial is being written. The outline below shows what it will cover.

The Image tab beside the H&E image of a mouse colon section: the H&E and Xenium DAPI layers, opacity, cells hidden, the levels histogram with gamma, and saturation.
The Image tab: H&E under the cells, with its opacity, levels and gamma.Xenium 5K · mouse colon · H&E
On this page6
  1. Supported files
  2. Attach an image
  3. Registration
  4. Channels and colours
  5. Levels and gamma
  6. Several images at once

Supported files

Attach an image

Registration

Channels and colours

Levels and gamma

Several images at once