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DataMultimodal

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Multimodal

Compare RNA, chromatin accessibility, histone marks and protein measured on the same spots.

Tutorial in preparation

This tutorial is being written. The outline below shows what it will cover.

  • Pde10a, RNA (expression)RNAexpression
  • Pde10a, ATAC (open chromatin)ATACopen chromatin
  • Pde10a, H3K27ac (active mark)H3K27acactive mark
  • Pde10a, H3K27me3 (repressive mark)H3K27me3repressive mark
One gene, Pde10a, in four modalities measured on the same spots.Multi-omicsSpatial-Mux-seq · mouse brain · 9,686 spots
On this page6
  1. Declare modalities at import
  2. Find a feature across modalities
  3. Single, side by side, blend or split
  4. Coupling and agreement
  5. States and lead–lag
  6. Protein channels

Declare modalities at import

Find a feature across modalities

Single, side by side, blend or split

Coupling and agreement

States and lead–lag

Protein channels